miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|30225031|gb|CB939640.1|CB939640 CACACACACACACGCTTAATTAATGTCAGTCACAGAGGATTAATTTACTGCTTTATCATAGATATGACGACACAGGCCCT
TTGTGTGTGCATGTGTGTGTTTATCACCGCGGTAATGATCAGTGTGTCGGCAGAGCGCTCGTTCTCTATAGACTACAGTA
ACGACTGCTTCCTGAAAGACGAACAGTATTTCCGCTTTGTTTCCGGCAGTGTTCATTATTTCCGAGTCCCACGCTGCTAC
TGGAAGGACAGACTGATGAAGATGTACATGAGCGGCCTCAACGCCATTCAGGTGTATGTGCCCTGGAACTTCCATGAGCC
AGTGCAAGGGGTGTACAACTTTGAGGGGGACAGAGATTTGGAATATTTCCTCCATCTGGCCAACGAGACGGGCCTGCTGG
TGATCCTGAGGCCCGGACCTTACATCTGTGCCGAGTGGGAAATGGGAGGTCTCCCTGCATGGCTGCTCCACAACCCCAAA
ATTATCCTGCGGTCAGCAGATTCAGAATACATGCAGGCTGTAGGTGATTGGTTGGCTGTGCTGCTCATTAAAATGCGGAC
GTGGCTCTATC




Most similar to sp|Q5R7P4|BGAL_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R7P4|BGAL_PONAB Beta-galactosidase OS=Pongo abelii GN=GLB1
           PE=2 SV=1
          Length = 677

 Score =  224 bits (570), Expect = 4e-58
 Identities = 103/148 (69%), Positives = 117/148 (79%)
 Frame = +1

Query: 127 SAERSFSIDYSNDCFLKDEQYFRFVSGSVHYFRVPRCYWKDRLMKMYMSGLNAIQVYVPW 306
           + +R F IDYS DCFLKD Q FR++SGS+HY RVPR YWKDRL+KM M+GLNAIQ YVPW
Sbjct: 27  ATQRMFEIDYSRDCFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPW 86

Query: 307 NFHEPVQGVYNFEGDRDLEYFLHLANETGLLVILRPGPYICAEWEMGGLPAWLLHNPKII 486
           NFHEP  G Y F  D D+EYFL LA+E GLLVILRPGPYICAEWEMGGLPAWLL    I+
Sbjct: 87  NFHEPWPGQYQFSEDHDVEYFLQLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESIL 146

Query: 487 LRSADSEYMQAVGDWLAVLLIKMRTWLY 570
           LRS+D +Y+ AV  WL VLL KM+  LY
Sbjct: 147 LRSSDPDYLAAVDKWLGVLLPKMKPLLY 174